CDS
Accession Number | TCMCG006C107957 |
gbkey | CDS |
Protein Id | XP_013658446.2 |
Location | join(664..1110,1203..1463,1542..1922,2002..2196,2297..2451,2989..3877) |
Gene | LOC106363204 |
GeneID | 106363204 |
Organism | Brassica napus |
Protein
Length | 775aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA293435 |
db_source | XM_013802992.2 |
Definition | protein RDM16-like isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
COG_category | A |
Description | Small nuclear ribonucleoprotein |
KEGG_TC | - |
KEGG_Module |
M00354
[VIEW IN KEGG] |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
KEGG_ko |
ko:K12843
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
GOs | - |
Sequence
CDS: ATGGATAAGGAGAGATACAGGAGCACCAGGGACTATCGCGATCGTGATTCGAGTGCGGATCGTTCGCCGGAACGCGAAGCCGGACGCCGCCATCGCAATGGAGATTCAAAGCGTCGCGATTCAGATCACCACCTGTCATCGAGGCGCGACGATAGGGAGGATGAGAGAGATAGAGCTCGGGAGAGAAGGAGATCTGTCGAGCGAAGCGAGAGGGAAGGGAGTAGAGATAGGGAGAGGTCTCACGAAGGAAGTAAAGATAAGGAAACGAGGAGCAAGAGGAAAGAGAGAGAGGAGGAGAACGGGAATAAGGAAGGGAAGAAGAGATCTAGGTTCTCTGATGGGAGTGGTGGTGGTGGTGAGAGGAGAAGCAGGTTTGAGGATGAGAGCAAAAATGATCAAGTGAGTGAGGGTTCTAGGGCTACGAACGCAGCTAGTGACGTCTCCACTGGCGTCACTTCGCATAGTTCTTTAGCTTCGGAAACGTCTTTAGCCCCTAGTCAAACCCTGCTCACTAAGGTATCTTCAATATCCACAACGGATGAAAATAAGAGTATTGTCAGGTCTCATGAGGTTCATGGAAAATCTAGTACAGATGGAAGAACTTCCGGGCAAAGTAGTTCAAACTTGTCTCTTGATGCATTAGCTAAAGCTAAGAAAGCTATTCAGCTTGGAAAGGGATTAGCCGACAGGTTTAAGAAACTTTCTTCGGCGAATCAAGGTATTAAGTTGGCTTCAGAAGGTAGCCCACATGCTAGAGTGCCACCATCGACTACCACTCCTGCTGTCTCTGCAGGAACATCTTCTGCTTCAGCATTACCACATGCTGTCTTGCCTGGCCTTGGGAATAAGGTCAACATTGAAGCTGTTAAGAGAGCTCAGGAGGTGGCAGCTAGGATGGGGTACCGTCAGGATCCAGAGTTTCCTACCATTATCAATTATCTTCTAGGACAGACACCTGCAGAGACGATGGCTGTTCAACAGAAACCTGCAAAGGCTCCTGTTCTGCGTGTGGATGCCCTTGGAAGGGAGATAGATGAACATGGAAATGTGATTAGCGTGACTAAGCCAAGCAATCTTAGTACATTAAAGGTTAATATCAACAAACAGAAGAAAGATGCCTTTCAGATTCTTAAACCTCAACTGGAAGTAAATCCAGAAGAAAACCCCCACTTTGATCCGAGGATGGGGATTGACAAAAACAAGATTTTGAGACCCAAGCGTATGAGTTTTCAGTTTGTTGAGGAAGGTAAATGGACAAGAGATGCTGAGAGTTTGAAGTTGAGGAGTCAATTTGGTGAAGCAAAAGCAAGAGAGCTGAAGGTGAAGCAAGCGCATCTGGCTAAGGCCAGGGATGATATAAATCCAAATTTGATCGAGGTATCAGAACGTGCCCCGAGAAAAGAGAAGCCCAAGGAGATAATCCCAGATGTTGAGTGGTGGGATGCAGCTGTCCTCACAAATGGCGTGTATGGCGACATAGCTGATGGTACCATTACCGATAGCGATCTGAAGACAGAAAAACTAACACATTACATAGAGCATCCACGTCCCATAGAGCCACCTGCAGAGGCAGCGCCTCCACCACCCCAGCCTCTTAAACTGACAAAGAGGGAGCAGAAGAAACTTCGAACCCAGAGGCGTCTGGCAAAAGAAAAGGAGAAACAGGAGATGATCAGACAAGGGTTGCTTGAACCACCAAAAGCAAAGGTGAAAATGAGCAATCTGATGAAGGTTCTTGGGTCTGAAGCAACGCAAGACCCAACCAAGCTTGAGAAGGAGATCCGCACAGCAGCAGCCGAACGTGAACAGGCTCACACGGACAGGAACGCAGCACGGAAGCTAACACCTGCAGAGAAACGTGAGAAGAAAGAGAGGAAGCTTTTCGATGATCCAACAACGATCGAGACAATAGTGTCGGTGTACAAGATCAACAAGCTCTCTCATCCTAAGACGAGATTCAAGGTGGAGATGAACGCTAGGGAGAACAGATTAACCGGGTGTAGCGTGATGACAGATGAAATGAGTGTGGTGGTGGTGGAGGGTAAGAGCAAAGCCATAAAGAGATACGGGAAACTGATGCTGAGGCGGATAAACTGGGCAGAAGCAGTGAAGAAGGATGAGAAGGAAGGAGAGGAAGAAAACGATGACGAAGAAGAGAATGGTGGAAACAACAAGTGCTGGTTAGTTTGGCAAGGAAGCGTTGGGAAACCGAGTTTTCATAGGTTTCTTGTACAAGAGTGCTTAACTGAATCTGCTGCCAAAAAAGTTTTCACGGATGCTGGTGTCGCTCACTACTGGGACCTCGCGGTCAACTACACAGAAGACTAA |
Protein: MDKERYRSTRDYRDRDSSADRSPEREAGRRHRNGDSKRRDSDHHLSSRRDDREDERDRARERRRSVERSEREGSRDRERSHEGSKDKETRSKRKEREEENGNKEGKKRSRFSDGSGGGGERRSRFEDESKNDQVSEGSRATNAASDVSTGVTSHSSLASETSLAPSQTLLTKVSSISTTDENKSIVRSHEVHGKSSTDGRTSGQSSSNLSLDALAKAKKAIQLGKGLADRFKKLSSANQGIKLASEGSPHARVPPSTTTPAVSAGTSSASALPHAVLPGLGNKVNIEAVKRAQEVAARMGYRQDPEFPTIINYLLGQTPAETMAVQQKPAKAPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKQKKDAFQILKPQLEVNPEENPHFDPRMGIDKNKILRPKRMSFQFVEEGKWTRDAESLKLRSQFGEAKARELKVKQAHLAKARDDINPNLIEVSERAPRKEKPKEIIPDVEWWDAAVLTNGVYGDIADGTITDSDLKTEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKREQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTIETIVSVYKINKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMLRRINWAEAVKKDEKEGEEENDDEEENGGNNKCWLVWQGSVGKPSFHRFLVQECLTESAAKKVFTDAGVAHYWDLAVNYTED |